Class Hierarchy

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## Hierarchy For All Packages

Package Hierarchies:
  java, java.awt, java.awt.geom, java.lang, uk, uk.ac, uk.ac.bbk, uk.ac.bbk.dcs, uk.ac.bbk.dcs.automed, uk.ac.bbk.dcs.automed.dataWarehousing, uk.ac.bbk.dcs.automed.dataWarehousing.dlt, uk.ac.bbk.dcs.automed.dataWarehousing.util, uk.ac.bbk.dcs.automed.evolution, uk.ac.bbk.dcs.automed.evolution.dataEvolution, uk.ac.bbk.dcs.automed.evolution.schemaModelEvolution, uk.ac.bbk.dcs.automed.evolution1, uk.ac.bbk.dcs.automed.evolution2, uk.ac.bbk.dcs.automed.evolution2.dataEvolution, uk.ac.bbk.dcs.automed.evolution2.modelEvolution, uk.ac.bbk.dcs.automed.evolution2.schemaEvolution, uk.ac.bbk.dcs.automed.graph, uk.ac.bbk.dcs.automed.hdmstore, uk.ac.bbk.dcs.automed.qproc, uk.ac.bbk.dcs.automed.qproc.annotate, uk.ac.bbk.dcs.automed.qproc.annotate.grammars, uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes, uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp, uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend, uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus, uk.ac.bbk.dcs.automed.qproc.evaluate, uk.ac.bbk.dcs.automed.qproc.functions, uk.ac.bbk.dcs.automed.qproc.functions.arithmetic, uk.ac.bbk.dcs.automed.qproc.functions.collections, uk.ac.bbk.dcs.automed.qproc.functions.comparison, uk.ac.bbk.dcs.automed.qproc.functions.date, uk.ac.bbk.dcs.automed.qproc.functions.internal, uk.ac.bbk.dcs.automed.qproc.functions.logical, uk.ac.bbk.dcs.automed.qproc.functions.string, uk.ac.bbk.dcs.automed.qproc.functions.typeConversion, uk.ac.bbk.dcs.automed.qproc.iql, uk.ac.bbk.dcs.automed.qproc.optimise, uk.ac.bbk.dcs.automed.qproc.optimise.optimisers, uk.ac.bbk.dcs.automed.qproc.reformulate, uk.ac.bbk.dcs.automed.qproc.translators, uk.ac.bbk.dcs.automed.qproc.translators.xquery, uk.ac.bbk.dcs.automed.rdfs, uk.ac.bbk.dcs.automed.wrappers, uk.ac.bbk.dcs.automed.xml, uk.ac.bbk.dcs.automed.xml.experiments, uk.ac.bbk.dcs.automed.xml.experiments.crime, uk.ac.bbk.dcs.automed.xml.experiments.other, uk.ac.bbk.dcs.automed.xml.experiments.other.set0, uk.ac.bbk.dcs.automed.xml.experiments.other.set1, uk.ac.bbk.dcs.automed.xml.experiments.other.set2, uk.ac.bbk.dcs.automed.xml.experiments.other.set3, uk.ac.bbk.dcs.automed.xml.experiments.skolem, uk.ac.bbk.dcs.automed.xml.experiments.subclass, uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1, uk.ac.bbk.dcs.automed.xml.experiments.subclassANDskolem, uk.ac.bbk.dcs.automed.xml.experiments.thesis, uk.ac.bbk.dcs.automed.xml.experiments.ws, uk.ac.bbk.dcs.automed.xml.functions, uk.ac.bbk.dcs.automed.xml.materialisation, uk.ac.bbk.dcs.automed.xml.relational, uk.ac.bbk.dcs.automed.xml.utilities, uk.ac.bbk.dcs.automed.xml.wrappers, uk.ac.bbk.dcs.automed.xml.xmldssGraph, uk.ac.ic, uk.ac.ic.doc, uk.ac.ic.doc.automed, uk.ac.ic.doc.automed.editor, uk.ac.ic.doc.automed.editor.autolayout, uk.ac.ic.doc.automed.editor.drawables, uk.ac.ic.doc.automed.editor.layout, uk.ac.ic.doc.automed.matching, uk.ac.ic.doc.automed.matching.modules, uk.ac.ic.doc.automed.matching.modules.bidirectionalmap, uk.ac.ic.doc.automed.matching.modules.intervals, uk.ac.ic.doc.automed.matching.modules.probability, uk.ac.ic.doc.automed.matching.modules.probability.binary, uk.ac.ic.doc.automed.matching.modules.probability.senary, uk.ac.ic.doc.automed.matching.relationships, uk.ac.ic.doc.automed.p2p, uk.ac.ic.doc.automed.p2p.communication, uk.ac.ic.doc.automed.p2p.directory, uk.ac.ic.doc.automed.p2p.gui, uk.ac.ic.doc.automed.p2p.messages, uk.ac.ic.doc.automed.p2p.messages.abstractlayer, uk.ac.ic.doc.automed.p2p.messages.applicationlayer, uk.ac.ic.doc.automed.p2p.overlay, uk.ac.ic.doc.automed.p2p.protocol, uk.ac.ic.doc.automed.p2p.state, uk.ac.ic.doc.automed.p2p.tree, uk.ac.ic.doc.automed.p2p.util, uk.ac.ic.doc.automed.qproc, uk.ac.ic.doc.automed.qproc.cache, uk.ac.ic.doc.automed.qproc.eval, uk.ac.ic.doc.automed.qproc.functions, uk.ac.ic.doc.automed.qproc.functions.internal, uk.ac.ic.doc.automed.qproc.opti, uk.ac.ic.doc.automed.qproc.refo, uk.ac.ic.doc.automed.reps, uk.ac.ic.doc.automed.reps.pathway, uk.ac.ic.doc.automed.ssd, uk.ac.ic.doc.automed.tests, uk.ac.ic.doc.automed.tests.p2p, uk.ac.ic.doc.automed.tml, uk.ac.ic.doc.automed.util, uk.ac.ic.doc.automed.util.cache, uk.ac.ic.doc.automed.util.db, uk.ac.ic.doc.automed.util.hashing, uk.ac.ic.doc.automed.util.persist, uk.ac.ic.doc.automed.util.queue, uk.ac.ic.doc.automed.util.thread, uk.ac.ic.doc.automed.wrappers, uk.ac.ic.doc.automed.wrappers.ssdfunctions, uk.ac.ic.doc.automed.wrappers.xsdomobject, uk.ac.ic.doc.automed.xml, uk.ac.ic.doc.automed.xmlschema, uk.ac.ic.doc.automed.xmlschema.output, uk.ac.ic.doc.automed.xmlschema.tree, uk.ac.ic.doc.rodex, uk.ac.ic.doc.rodex.p2p, uk.ac.ic.doc.rodex.p2p.gui, uk.ac.ic.doc.rodex.p2p.messages, uk.ac.ic.doc.rodex.p2p.messages.applicationlayer, uk.ac.ic.doc.rodex.p2p.protocol, uk.ac.ic.doc.rodex.qproc, uk.ac.ic.doc.rodex.reps

## Class Hierarchy

- java.lang.Object
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.AbsoluteEuclideanClassifier (implements uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Classifier)
  - javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    - uk.ac.ic.doc.automed.editor.UserAction
  - javax.swing.AbstractCellEditor (implements javax.swing.CellEditor, java.io.Serializable)
    - uk.ac.ic.doc.automed.editor.TextEditor (implements javax.swing.table.TableCellEditor)
      - uk.ac.ic.doc.automed.editor.DetachedTextEditor
  - uk.ac.ic.doc.automed.p2p.communication.AbstractClient (implements uk.ac.ic.doc.automed.util.thread.Threadable)
    - uk.ac.ic.doc.automed.p2p.communication.TCPClient
    - uk.ac.ic.doc.automed.p2p.communication.UDPClient
  - java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    - java.util.AbstractList<E> (implements java.util.List<E>)
      - java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        - uk.ac.ic.doc.automed.editor.autolayout.ExpandedArrayList
        - uk.ac.bbk.dcs.automed.qproc.functions.ModifiedArray
  - uk.ac.ic.doc.automed.p2p.communication.AbstractDaemon (implements java.lang.Runnable)
  - java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    - java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      - uk.ac.ic.doc.automed.editor.autolayout.ExpandedHashMap
  - uk.ac.ic.doc.automed.p2p.messages.abstractlayer.AbstractMessage
  - uk.ac.ic.doc.automed.matching.modules.AbstractModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.AttributeJaccardExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.AttributeJaccardNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.AttributePrecisionModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.CheckExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.CheckExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.CheckExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.CheckExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.DataTypeModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.DataTypeModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.DataTypeModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.DataTypeModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.ElementNameModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.ElementNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.ElementNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.ElementNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.JaccardAtomicExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.JaccardExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.JaccardExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.JaccardExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.JaccardNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.JaccardNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.JaccardNameModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.JaroAtomicExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.JaroAtomicExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.JaroExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.JaroExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.JaroExistenceModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.NaiveBayesModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.NumberInstancesModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.NumberInstancesModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.NumberInstancesModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.PrecisionModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.PrecisionModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.PrecisionModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.PrecisionModule
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.StatisticsModule
    - uk.ac.ic.doc.automed.matching.modules.intervals.StatisticsModule
    - uk.ac.ic.doc.automed.matching.modules.probability.binary.StatisticsModule
    - uk.ac.ic.doc.automed.matching.modules.probability.senary.StatisticsModule
  - uk.ac.ic.doc.automed.p2p.tree.AbstractNetwork
  - uk.ac.bbk.dcs.automed.qproc.annotate.AbstractQueryAnnotationProvider (implements uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationProvider)
  - uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener (implements uk.ac.ic.doc.automed.p2p.communication.RequestListener)
    - uk.ac.ic.doc.automed.p2p.AutoMedPeer (implements uk.ac.ic.doc.automed.p2p.state.StateChangedListener)
      - uk.ac.ic.doc.rodex.p2p.Peer
        - uk.ac.ic.doc.rodex.p2p.DirectoryServicePeer
    - uk.ac.ic.doc.automed.p2p.KeepAliveMessageHandler
    - uk.ac.ic.doc.automed.p2p.directory.P2PDirectory
    - uk.ac.ic.doc.automed.p2p.P2PRegistry
    - uk.ac.ic.doc.automed.p2p.SimpleMessageHandler
    - uk.ac.ic.doc.automed.p2p.UnregisterPeerMessageHandler
    - uk.ac.ic.doc.automed.p2p.UpdateDataMessageHandler
  - uk.ac.ic.doc.automed.p2p.communication.AbstractServer (implements uk.ac.ic.doc.automed.util.thread.Threadable)
    - uk.ac.ic.doc.automed.p2p.communication.TCPServer
    - uk.ac.ic.doc.automed.p2p.communication.UDPServer
      - uk.ac.ic.doc.automed.p2p.communication.MulticastServer
  - javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    - uk.ac.ic.doc.automed.p2p.gui.PeerTableModel
  - uk.ac.ic.doc.automed.reps.AccessMethod (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.matching.Aggregator
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.AlgoPerfExp
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.AlgoPerfExp
  - uk.ac.ic.doc.automed.p2p.AppToolKit
  - uk.ac.ic.doc.automed.p2p.AppToolKit.NodeConfig
  - uk.ac.bbk.dcs.automed.qproc.iql.ASG (implements uk.ac.ic.doc.automed.reps.PersistentObject, java.io.Serializable)
    - uk.ac.bbk.dcs.automed.qproc.iql.ASGCollection
    - uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension
      - uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehensionMiniCon
    - uk.ac.ic.doc.automed.qproc.ASGQuery
    - uk.ac.bbk.dcs.automed.qproc.iql.ASGTuple
  - uk.ac.bbk.dcs.automed.qproc.iql.ASGCollectionIterator (implements java.util.Iterator<E>)
  - uk.ac.ic.doc.rodex.qproc.ASGExplore
  - uk.ac.bbk.dcs.automed.qproc.reformulate.AtomicViewMap
  - uk.ac.ic.doc.rodex.reps.AttributeDomain (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.p2p.AuthenticationHelper
  - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.AuthenticationTuple (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.editor.autolayout.AutoLayout
  - uk.ac.ic.doc.automed.editor.autolayout.AutoLayoutPositionable
    - uk.ac.ic.doc.automed.editor.autolayout.AutoLayoutSchemaObject
      - uk.ac.ic.doc.automed.editor.autolayout.AutoLayoutERObject
      - uk.ac.ic.doc.automed.editor.autolayout.AutoLayoutSpringObject
      - uk.ac.ic.doc.automed.editor.autolayout.AutoLayoutTreeObject
  - uk.ac.ic.doc.automed.p2p.AutoMedMessagingHelper
  - uk.ac.ic.doc.automed.p2p.AutoMedPeer.PeerProcessDescription
  - uk.ac.ic.doc.automed.wrappers.AutoMedQuery
    - uk.ac.ic.doc.automed.wrappers.SQLQuery
    - uk.ac.ic.doc.automed.wrappers.YattaQuery
  - uk.ac.ic.doc.automed.wrappers.AutoMedQueryToken
  - uk.ac.ic.doc.automed.wrappers.AutoMedResult
    - uk.ac.ic.doc.automed.wrappers.SQLResult
    - uk.ac.ic.doc.automed.wrappers.YattaQueryResult
  - uk.ac.ic.doc.automed.reps.AutoMedToXSDOM
  - uk.ac.ic.doc.automed.wrappers.AutoMedType
    - uk.ac.ic.doc.automed.wrappers.AutoMedBoolean
    - uk.ac.ic.doc.automed.wrappers.AutoMedFloat
    - uk.ac.ic.doc.automed.wrappers.AutoMedInteger
    - uk.ac.ic.doc.automed.wrappers.AutoMedString
    - uk.ac.ic.doc.automed.wrappers.AutoMedTime
    - uk.ac.ic.doc.automed.wrappers.AutoMedTuple
  - uk.ac.ic.doc.automed.wrappers.AutoMedWrapper
    - uk.ac.ic.doc.automed.wrappers.CSVWrapper
    - uk.ac.bbk.dcs.automed.hdmstore.HdmWrapper
    - uk.ac.ic.doc.automed.wrappers.HDMWrapper
    - uk.ac.ic.doc.automed.wrappers.P2PWrapper
    - uk.ac.ic.doc.automed.wrappers.QueryCacheWrapper
    - uk.ac.ic.doc.automed.wrappers.SQLWrapper
      - uk.ac.ic.doc.automed.wrappers.HsqldbWrapper
      - uk.ac.bbk.dcs.automed.wrappers.MSAccessWrapper
      - uk.ac.ic.doc.automed.wrappers.OracleWrapper
      - uk.ac.ic.doc.automed.wrappers.PostgresWrapper
      - uk.ac.ic.doc.automed.wrappers.TransactSQLWrapper
    - uk.ac.ic.doc.automed.wrappers.XMLSchemaWrapper
    - uk.ac.bbk.dcs.automed.xml.wrappers.XMLWrapper
      - uk.ac.bbk.dcs.automed.xml.wrappers.DOMWrapper
      - uk.ac.bbk.dcs.automed.xml.wrappers.NXDBWrapper
        - uk.ac.bbk.dcs.automed.xml.wrappers.EXISTWrapper
      - uk.ac.bbk.dcs.automed.xml.wrappers.SAXWrapper
    - uk.ac.ic.doc.automed.wrappers.YattaWrapper
  - uk.ac.ic.doc.automed.wrappers.AutoMedWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.CSVWrapperFactory
    - uk.ac.bbk.dcs.automed.hdmstore.HdmWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.HDMWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.P2PWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.SQLWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.HsqldbWrapperFactory
      - uk.ac.bbk.dcs.automed.wrappers.MSAccessWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.OracleWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.PostgresWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.QueryCacheWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.SchemaMatchingSQLWrapperFactory
      - uk.ac.ic.doc.automed.wrappers.TransactSQLWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.XMLSchemaWrapperFactory
    - uk.ac.bbk.dcs.automed.xml.wrappers.XMLWrapperFactory
      - uk.ac.bbk.dcs.automed.xml.wrappers.DOMWrapperFactory
      - uk.ac.bbk.dcs.automed.xml.wrappers.NXDBWrapperFactory
        - uk.ac.bbk.dcs.automed.xml.wrappers.EXISTWrapperFactory
      - uk.ac.bbk.dcs.automed.xml.wrappers.SAXWrapperFactory
    - uk.ac.ic.doc.automed.wrappers.YattaWrapperFactory
  - uk.ac.ic.doc.automed.matching.Averages
  - uk.ac.ic.doc.automed.matching.BidirectionalDegree
  - uk.ac.ic.doc.automed.matching.BidirectionalMap
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.Books
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.Books1
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.Books1Query
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.Books2
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.Books2Query
  - uk.ac.bbk.dcs.automed.xml.experiments.thesis.BooksQuery
  - uk.ac.ic.doc.automed.p2p.messages.applicationlayer.BrokerAllQuery (implements uk.ac.ic.doc.automed.p2p.messages.applicationlayer.ApplicationMessage)
  - uk.ac.ic.doc.automed.p2p.BrokerRequestReceiver
  - uk.ac.ic.doc.automed.p2p.BrokerRequestSender
  - uk.ac.ic.doc.automed.xmlschema.tree.BuildJTree
  - uk.ac.bbk.dcs.automed.qproc.functions.BuiltInFunction
    - uk.ac.bbk.dcs.automed.qproc.functions.logical.And
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Append
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Average
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.Bag2List
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.Bag2Set
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.BComprehension
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.CallToWrapper
      - uk.ac.ic.doc.automed.qproc.functions.internal.Call2Wrapper
    - uk.ac.bbk.dcs.automed.qproc.functions.Choose
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.Comprehension
    - uk.ac.bbk.dcs.automed.qproc.functions.string.Concat
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Count
    - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeIQLFun1
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Div
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Divide
    - uk.ac.bbk.dcs.automed.xml.functions.ElementsFromRDB
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.Equals
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Flatmap
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Foldl
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Foldr
    - uk.ac.bbk.dcs.automed.xml.functions.GenerateElemUID
    - uk.ac.bbk.dcs.automed.xml.functions.GenerateElemUIDOffSet
    - uk.ac.ic.doc.automed.wrappers.ssdfunctions.generateGID
    - uk.ac.bbk.dcs.automed.xml.functions.GenerateNestLists
    - uk.ac.ic.doc.automed.wrappers.ssdfunctions.generateSID
    - uk.ac.bbk.dcs.automed.qproc.functions.date.GetMonth
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.Greater
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.GreaterEqual
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.Group
      - uk.ac.bbk.dcs.automed.qproc.functions.comparison.GroupCompute
    - uk.ac.bbk.dcs.automed.qproc.functions.Id
    - uk.ac.bbk.dcs.automed.qproc.functions.logical.If
    - uk.ac.bbk.dcs.automed.qproc.functions.string.IndexOf
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Intersect
    - uk.ac.bbk.dcs.automed.qproc.functions.string.LastIndexOf
    - uk.ac.bbk.dcs.automed.qproc.functions.string.Length
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.Less
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.LessEqual
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.Let
    - uk.ac.bbk.dcs.automed.qproc.functions.string.Like
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.List2Bag
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.List2Set
    - uk.ac.bbk.dcs.automed.qproc.functions.LoadFromFile
    - uk.ac.bbk.dcs.automed.qproc.functions.string.LowerCase
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Map
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Max
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Member
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Min
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Minus
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Mod
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Monus
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Multiply
    - uk.ac.bbk.dcs.automed.xml.functions.NestListsFromRDB
    - uk.ac.bbk.dcs.automed.qproc.functions.logical.Not
    - uk.ac.bbk.dcs.automed.qproc.functions.comparison.NotEqual
    - uk.ac.bbk.dcs.automed.qproc.functions.logical.Or
    - uk.ac.bbk.dcs.automed.qproc.functions.PairFirst
    - uk.ac.bbk.dcs.automed.qproc.functions.PairSecond
    - uk.ac.bbk.dcs.automed.qproc.functions.arithmetic.Plus
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.Range
    - uk.ac.bbk.dcs.automed.xml.functions.RenameUID
    - uk.ac.bbk.dcs.automed.qproc.functions.internal.SComprehension
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.Set2Bag
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.Set2List
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Single
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.SingleBag
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.SingleSet
    - uk.ac.bbk.dcs.automed.xml.functions.SkolemiseEdge
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Sort
      - uk.ac.bbk.dcs.automed.qproc.functions.collections.Difference
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.SortDistinct
      - uk.ac.bbk.dcs.automed.qproc.functions.collections.Union
    - uk.ac.bbk.dcs.automed.qproc.functions.string.Split
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.SubCollection
    - uk.ac.bbk.dcs.automed.qproc.functions.string.Substring
    - uk.ac.bbk.dcs.automed.qproc.functions.collections.Sum
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.ToDateTime
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.ToFloat
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.ToInteger
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.ToString
    - uk.ac.bbk.dcs.automed.qproc.functions.string.UpperCase
  - uk.ac.ic.doc.automed.util.cache.CacheContentDescription
  - uk.ac.ic.doc.automed.util.cache.CacheItem
  - uk.ac.ic.doc.automed.qproc.cache.CacheManager
  - uk.ac.ic.doc.automed.qproc.cache.CacheTK
  - uk.ac.bbk.dcs.automed.qproc.iql.Cell (implements uk.ac.ic.doc.automed.reps.PersistentObject, java.io.Serializable)
  - uk.ac.bbk.dcs.automed.qproc.iql.CFR
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.ChooseOptimiser
  - uk.ac.ic.doc.automed.p2p.communication.ClientFactory
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Clusterer
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.JSomClusterer
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.ClustererClassifier
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.CollectionOperatorReorganiser
  - uk.ac.ic.doc.automed.editor.CommandLineDriver
    - uk.ac.ic.doc.automed.editor.Editor
  - uk.ac.bbk.dcs.automed.qproc.functions.comparison.Comparisons
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.CompGenReorganiser
  - java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    - java.awt.Container
      - javax.swing.JComponent (implements java.io.Serializable)
        - javax.swing.JInternalFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
          - uk.ac.ic.doc.automed.editor.Gui.EditorFrame (implements uk.ac.ic.doc.automed.reps.ModelsListener, uk.ac.ic.doc.automed.reps.NetworkChangeListener, uk.ac.ic.doc.automed.reps.NetworksListener, uk.ac.ic.doc.automed.reps.SchemaChangeListener, uk.ac.ic.doc.automed.reps.SchemasListener)
        - javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          - uk.ac.ic.doc.automed.xmlschema.tree.IconAndTipRenderer (implements javax.swing.tree.TreeCellRenderer)
        - javax.swing.JLayeredPane (implements javax.accessibility.Accessible)
          - javax.swing.JDesktopPane (implements javax.accessibility.Accessible)
            - uk.ac.ic.doc.automed.editor.Gui
              - uk.ac.ic.doc.rodex.p2p.gui.GuiApplication
        - javax.swing.JPanel (implements javax.accessibility.Accessible)
          - uk.ac.ic.doc.rodex.p2p.gui.CacheViewerPanel (implements uk.ac.ic.doc.automed.util.cache.CacheManagementListener)
          - uk.ac.ic.doc.automed.editor.EditorPanel
          - uk.ac.ic.doc.automed.editor.PatternWritingTool.DynamicTree
          - uk.ac.ic.doc.automed.p2p.gui.TablePanel
        - javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
          - uk.ac.ic.doc.automed.p2p.gui.PeerTable
      - java.awt.Window (implements javax.accessibility.Accessible)
        - java.awt.Dialog
          - javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - uk.ac.ic.doc.automed.p2p.gui.InputDialog
        - java.awt.Frame (implements java.awt.MenuContainer)
          - javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - uk.ac.ic.doc.rodex.p2p.gui.CacheViewers
            - uk.ac.bbk.dcs.automed.dataWarehousing.dltInterface
            - uk.ac.ic.doc.automed.editor.GUITool (implements java.awt.event.ActionListener)
              - uk.ac.ic.doc.rodex.p2p.gui.CacheViewerFrame
              - uk.ac.ic.doc.automed.editor.IQLTool
                - uk.ac.ic.doc.rodex.p2p.gui.QueryTool
              - uk.ac.ic.doc.automed.editor.MatchingTool (implements java.awt.event.ItemListener, java.awt.event.MouseListener, java.lang.Runnable)
              - uk.ac.ic.doc.automed.editor.PathwayOptimiserTool (implements java.awt.event.ActionListener)
              - uk.ac.ic.doc.automed.editor.ReportException
              - uk.ac.ic.doc.automed.editor.WrapperTool (implements java.awt.event.ActionListener)
              - uk.ac.ic.doc.automed.editor.XMLSchemaEditor
            - uk.ac.ic.doc.automed.editor.LogConsole
            - uk.ac.ic.doc.automed.p2p.gui.LoginFrame (implements java.awt.event.ActionListener, uk.ac.ic.doc.automed.p2p.state.StateChangedListener)
              - uk.ac.ic.doc.rodex.p2p.gui.LoginGui
            - uk.ac.ic.doc.automed.p2p.gui.MainFrame
              - uk.ac.ic.doc.automed.p2p.gui.AllSchemasFrame
              - uk.ac.ic.doc.automed.p2p.gui.MySchemasFrame
              - uk.ac.ic.doc.automed.p2p.gui.SchemaInfoFrame
            - uk.ac.ic.doc.automed.editor.PatternWritingTool
  - uk.ac.bbk.dcs.automed.qproc.reformulate.CompositeViewMap
    - uk.ac.bbk.dcs.automed.qproc.reformulate.BAVViewMap
    - uk.ac.bbk.dcs.automed.qproc.reformulate.GAVViewMap
    - uk.ac.bbk.dcs.automed.qproc.reformulate.LAVInvRulesViewMap
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.ComprehensionDistributor
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.ComprehensionSimplification
  - uk.ac.ic.doc.automed.p2p.Constants
  - uk.ac.ic.doc.automed.util.db.Constants
  - uk.ac.ic.doc.automed.wrappers.Constants
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.ConstantSimplification
  - uk.ac.ic.doc.automed.reps.Construct (implements java.util.Comparator<T>, uk.ac.ic.doc.automed.reps.PersistentObject, uk.ac.ic.doc.automed.editor.Positionable)
  - uk.ac.ic.doc.automed.reps.ConstructConstraint (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.reps.ConstructScheme (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeSchemaConform
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeSchemaMaterialisation
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeSchemaQuery
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeSchemaQueryTest
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeSchemaWrap
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeTest
  - uk.ac.bbk.dcs.automed.evolution.dataEvolution.DataEvolution (implements uk.ac.bbk.dcs.automed.evolution.Evolution)
  - uk.ac.bbk.dcs.automed.evolution2.dataEvolution.DataEvolution (implements uk.ac.bbk.dcs.automed.evolution2.Evolution)
  - uk.ac.bbk.dcs.automed.dataWarehousing.dlt.DataLineageTracing
  - uk.ac.ic.doc.automed.reps.DataSource (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.util.DateUtil
  - uk.ac.ic.doc.automed.util.db.DBAccess
    - uk.ac.ic.doc.automed.util.db.DBEmbedded
      - uk.ac.ic.doc.automed.util.db.QueryCacheSQLAdapter (implements uk.ac.ic.doc.automed.util.persist.PersistentHandler)
    - uk.ac.ic.doc.automed.util.db.DBPostgres
  - uk.ac.ic.doc.automed.util.db.DBAccessFactory
  - uk.ac.ic.doc.automed.util.db.DBRecord (implements java.io.Serializable)
    - uk.ac.ic.doc.automed.util.db.DBRecordWithConstraints (implements java.io.Serializable)
  - uk.ac.ic.doc.automed.util.db.DBResultSet
  - uk.ac.ic.doc.automed.util.db.DBToolKit
  - uk.ac.bbk.dcs.automed.hdmstore.Debug
  - uk.ac.ic.doc.automed.util.Debugger
  - uk.ac.ic.doc.automed.qproc.cache.DefaultCachePolicy (implements uk.ac.ic.doc.automed.qproc.cache.CachePolicy)
    - uk.ac.ic.doc.automed.qproc.cache.CachePolicy2
    - uk.ac.ic.doc.automed.qproc.cache.CachePolicy3
  - org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSSAX
  - uk.ac.ic.doc.automed.reps.pathway.DefaultPathwayFinder (implements uk.ac.ic.doc.automed.reps.pathway.PathwayFinder)
  - uk.ac.ic.doc.automed.qproc.cache.DefaultQueryCache (implements uk.ac.ic.doc.automed.qproc.cache.IQueryCache, java.util.Iterator<E>, uk.ac.ic.doc.automed.util.persist.Persistence)
    - uk.ac.ic.doc.rodex.qproc.QueryCache
  - uk.ac.ic.doc.automed.matching.DegreeCombinator
  - uk.ac.bbk.dcs.automed.dataWarehousing.dlt.DemoDLT
  - ow.dht.DHTFactory
    - uk.ac.ic.doc.automed.p2p.overlay.EnhancedDHTFactory
  - ow.dht.impl.DHTImpl<V> (implements ow.dht.advanced.AdvancedDHT<V>)
    - uk.ac.ic.doc.automed.p2p.overlay.EnhancedDHTImpl
  - uk.ac.bbk.dcs.automed.graph.DirectedGraph
  - uk.ac.bbk.dcs.automed.graph.DirectedGraphNode
  - uk.ac.ic.doc.automed.wrappers.xsdomobject.Document
  - jsom.data.DoublePattern (implements jsom.data.Pattern)
    - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Cluster
    - uk.ac.ic.doc.automed.matching.modules.ElementVectorRepresentation
  - uk.ac.ic.doc.automed.editor.autolayout.DPoint
  - uk.ac.ic.doc.automed.editor.DrawArc (implements uk.ac.ic.doc.automed.editor.DrawableArc)
    - uk.ac.ic.doc.automed.editor.DefaultDrawConstraintArc
      - uk.ac.ic.doc.automed.editor.drawables.DrawERGeneralisationArc
      - uk.ac.ic.doc.automed.editor.drawables.DrawHDMArc
    - uk.ac.ic.doc.automed.editor.DefaultDrawLinkArc
    - uk.ac.ic.doc.automed.editor.DefaultDrawLinkNodalArc
      - uk.ac.ic.doc.automed.editor.drawables.DrawXSArc
    - uk.ac.ic.doc.automed.editor.drawables.DrawAMRDBForeignKeyArc
    - uk.ac.ic.doc.automed.editor.drawables.DrawAMRDBPrimaryKeyArc
    - uk.ac.ic.doc.automed.editor.drawables.DrawERRelationshipArc
      - uk.ac.ic.doc.automed.editor.drawables.DrawEERRelationshipArc
    - uk.ac.ic.doc.automed.editor.drawables.DrawRDBForeignKeyArc
    - uk.ac.ic.doc.automed.editor.drawables.DrawRDBPrimaryKeyArc
    - uk.ac.ic.doc.automed.editor.DrawTransformation
    - uk.ac.ic.doc.automed.editor.drawables.YattaDrawLinkNodalLink
    - uk.ac.ic.doc.automed.editor.drawables.YattaDrawSequence
  - uk.ac.ic.doc.automed.editor.DrawVertex (implements uk.ac.ic.doc.automed.editor.DrawableVertex)
    - uk.ac.ic.doc.automed.editor.DefaultDrawConstraintVertex
      - uk.ac.ic.doc.automed.editor.drawables.DrawRDBForeignKeyVertex
        - uk.ac.ic.doc.automed.editor.drawables.DrawRDBPrimaryKeyVertex
    - uk.ac.ic.doc.automed.editor.DefaultDrawLinkNodalVertex
      - uk.ac.ic.doc.automed.editor.drawables.DrawEERAttributeVertex
    - uk.ac.ic.doc.automed.editor.DefaultDrawLinkVertex
    - uk.ac.ic.doc.automed.editor.DefaultDrawNodalVertex
      - uk.ac.ic.doc.automed.editor.drawables.DrawRDBTableVertex
    - uk.ac.ic.doc.automed.editor.drawables.DrawERGeneralisationVertex
    - uk.ac.ic.doc.automed.editor.drawables.DrawERRelationshipVertex
    - uk.ac.ic.doc.automed.editor.drawables.DrawHDMVertex
    - uk.ac.ic.doc.automed.editor.DrawNetwork
    - uk.ac.ic.doc.automed.editor.DrawSchema
  - uk.ac.ic.doc.automed.DSR (implements uk.ac.ic.doc.automed.xml.XMLifyConstants)
    - uk.ac.ic.doc.automed.DataSourceRepository
  - uk.ac.ic.doc.automed.DSRConfiguration
  - uk.ac.bbk.dcs.automed.hdmstore.Edge
  - uk.ac.bbk.dcs.automed.hdmstore.EdgeElement
  - uk.ac.bbk.dcs.automed.qproc.iql.Environment
  - uk.ac.bbk.dcs.automed.qproc.iql.EnvLexer (implements java_cup.runtime.Scanner)
  - uk.ac.bbk.dcs.automed.qproc.iql.EnvSym
  - uk.ac.bbk.dcs.automed.qproc.evaluate.Evaluator (implements uk.ac.ic.doc.automed.qproc.eval.QueryEvaluationProvider)
    - uk.ac.ic.doc.automed.qproc.eval.P2PQueryEvaluator
  - java.util.EventObject (implements java.io.Serializable)
    - uk.ac.ic.doc.automed.p2p.directory.PeerEvent
    - uk.ac.ic.doc.automed.p2p.directory.SchemaEvent
  - uk.ac.bbk.dcs.automed.evolution1.Evolution
    - uk.ac.bbk.dcs.automed.evolution1.ExtensionalSchemaEvolution
    - uk.ac.bbk.dcs.automed.evolution1.VirtualSchemaEvolution
  - uk.ac.bbk.dcs.automed.evolution.EvolutionUtility
  - uk.ac.bbk.dcs.automed.evolution2.EvolutionUtility
  - uk.ac.bbk.dcs.automed.qproc.optimise.ExperimentalOptimisationProvider
  - uk.ac.bbk.dcs.automed.xml.experiments.ExperimentsUtility
  - uk.ac.bbk.dcs.automed.evolution2.ExtendedConstruct
  - javax.swing.filechooser.FileFilter
    - uk.ac.ic.doc.automed.editor.DotExtensionFileFilter
    - uk.ac.ic.doc.automed.wrappers.XMLFileFilter
  - uk.ac.ic.doc.automed.matching.Filter
  - uk.ac.bbk.dcs.automed.qproc.iql.FLexer (implements java_cup.runtime.Scanner)
  - uk.ac.ic.doc.automed.p2p.directory.FlushTimeHelper (implements uk.ac.ic.doc.automed.util.queue.JobHandler, uk.ac.ic.doc.automed.util.thread.Threadable)
  - uk.ac.bbk.dcs.automed.qproc.optimise.FoldFunction
  - uk.ac.bbk.dcs.automed.qproc.optimise.FoldFunctionTable
    - uk.ac.bbk.dcs.automed.qproc.optimise.StandardFoldFunctionTable
  - uk.ac.bbk.dcs.automed.qproc.optimise.FoldNilRule (implements uk.ac.bbk.dcs.automed.qproc.optimise.Rule)
  - uk.ac.bbk.dcs.automed.graph.Forest
  - uk.ac.bbk.dcs.automed.xml.experiments.ws.FormatConversionIPI
  - java.util.logging.Formatter
    - uk.ac.bbk.dcs.automed.qproc.GQPFormatter
  - uk.ac.bbk.dcs.automed.qproc.annotate.FragmentProcessor (implements uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationProvider)
  - uk.ac.bbk.dcs.automed.qproc.iql.FSym
  - uk.ac.bbk.dcs.automed.qproc.FunctionTable
    - uk.ac.bbk.dcs.automed.xml.experiments.crime.CrimeFunctionTable
    - uk.ac.bbk.dcs.automed.qproc.functions.date.DateFunctionTable
    - uk.ac.bbk.dcs.automed.qproc.StandardFunctionTable
      - uk.ac.ic.doc.automed.wrappers.SSDFunctionTable
    - uk.ac.bbk.dcs.automed.qproc.functions.string.StringFunctionTable
    - uk.ac.bbk.dcs.automed.qproc.functions.typeConversion.TypeConversionFunctionTable
    - uk.ac.bbk.dcs.automed.xml.functions.XMLFunctionTable
  - uk.ac.bbk.dcs.automed.qproc.reformulate.GAVQueryReformulationProvider
  - uk.ac.bbk.dcs.automed.dataWarehousing.util.GetIQLSource
  - org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    - uk.ac.ic.doc.automed.xml.XMLReader (implements uk.ac.ic.doc.automed.xml.XMLifyConstants)
  - uk.ac.bbk.dcs.automed.hdmstore.HdmStore
  - uk.ac.bbk.dcs.automed.hdmstore.HdmStoreCmd
  - uk.ac.ic.doc.automed.reps.HDMToHighLevel
  - uk.ac.ic.doc.automed.reps.HDMTransformations
  - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.HelloMsg (implements uk.ac.ic.doc.automed.p2p.messages.applicationlayer.ApplicationMessage)
    - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.HelloAckMsg
  - uk.ac.ic.doc.automed.p2p.directory.HelloTimeHelper (implements uk.ac.ic.doc.automed.util.queue.JobHandler, uk.ac.ic.doc.automed.util.thread.Threadable)
  - uk.ac.ic.doc.rodex.p2p.protocol.HEP
  - uk.ac.ic.doc.automed.reps.HighLevelToHDM
  - uk.ac.ic.doc.automed.p2p.directory.HoldTimeHelper (implements uk.ac.ic.doc.automed.util.queue.JobHandler, uk.ac.ic.doc.automed.util.thread.Threadable)
  - uk.ac.ic.doc.automed.matching.Instance (implements java.util.Comparator<T>)
  - uk.ac.ic.doc.automed.matching.Integrator
    - uk.ac.ic.doc.automed.matching.SQLIntegrator
  - uk.ac.bbk.dcs.automed.qproc.reformulate.InverseRulesAlgorithm
  - uk.ac.bbk.dcs.automed.dataWarehousing.util.IQLEvaluator4DW
  - uk.ac.bbk.dcs.automed.wrappers.IQLTranslator
    - uk.ac.bbk.dcs.automed.xml.wrappers.IQL2XQuery
  - uk.ac.bbk.dcs.automed.qproc.iql.IQLUtility
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.IS1invIS2inv
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.IS1IS1super
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.IS1IS2
  - uk.ac.bbk.dcs.automed.xml.experiments.subclassANDskolem.IS1IS2skolem1
  - uk.ac.bbk.dcs.automed.xml.experiments.subclassANDskolem.IS1IS2skolem2
  - uk.ac.ic.doc.automed.util.queue.Job
  - uk.ac.ic.doc.automed.xmlschema.JTreeTransform
  - uk.ac.bbk.dcs.automed.dataWarehousing.dlt.Lineage
  - uk.ac.ic.doc.automed.util.ListUtil
  - java.util.logging.Logger
    - uk.ac.ic.doc.automed.util.LogController
  - uk.ac.ic.doc.automed.util.Logger
  - uk.ac.ic.doc.automed.util.LogOutputHandler
  - uk.ac.ic.doc.automed.util.LogServer
  - uk.ac.bbk.dcs.automed.hdmstore.LowLevelWrapperHdm
  - java_cup.runtime.lr_parser
    - uk.ac.bbk.dcs.automed.qproc.iql.EnvParser
    - uk.ac.bbk.dcs.automed.qproc.iql.QParser
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.MapDisplay
  - uk.ac.bbk.dcs.automed.xml.materialisation.Materialiser
    - uk.ac.bbk.dcs.automed.xml.materialisation.DOMMaterialiser
  - uk.ac.ic.doc.automed.MDR
  - uk.ac.ic.doc.automed.p2p.messages.abstractlayer.MessageFactory
  - uk.ac.ic.doc.automed.p2p.MessageHandler
  - uk.ac.ic.doc.rodex.qproc.MiniConQueryRewriter.MiniConDescription
  - uk.ac.ic.doc.automed.reps.Model (implements uk.ac.ic.doc.automed.reps.PersistentObject, uk.ac.ic.doc.automed.editor.Positionable)
  - uk.ac.ic.doc.automed.reps.ModelChangeEvent
  - uk.ac.ic.doc.automed.p2p.directory.ModelDescription (implements uk.ac.ic.doc.automed.p2p.directory.P2PDirectoryObject)
  - uk.ac.bbk.dcs.automed.evolution2.modelEvolution.ModelEvolution (implements uk.ac.bbk.dcs.automed.evolution2.Evolution)
  - uk.ac.ic.doc.automed.util.ModuleConnector
  - uk.ac.ic.doc.automed.reps.Network (implements uk.ac.ic.doc.automed.editor.Positionable)
  - uk.ac.ic.doc.automed.reps.NetworkChangeEvent
  - uk.ac.ic.doc.automed.reps.Node
  - uk.ac.ic.doc.automed.util.NumberToolkit
  - uk.ac.bbk.dcs.automed.xml.wrappers.NXDBSchemaManager
  - uk.ac.ic.doc.automed.p2p.tree.ObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.ASGObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.ModelObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.PathwayAbstractObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.PathwayDescriptionObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.SchemaObjectBuilder
    - uk.ac.ic.doc.automed.p2p.tree.TransformationAbstractionBuilder
  - uk.ac.ic.doc.automed.util.ObjectToolKit
  - uk.ac.bbk.dcs.automed.qproc.OldQueryProcessor
    - uk.ac.bbk.dcs.automed.qproc.GQP
  - uk.ac.ic.doc.automed.util.hashing.OrderPreservedHashing (implements uk.ac.ic.doc.automed.util.hashing.StringHash)
  - uk.ac.ic.doc.automed.p2p.overlay.OverlayController
  - uk.ac.ic.doc.automed.p2p.overlay.OverlayToolKit
  - uk.ac.ic.doc.automed.p2p.protocol.P2PConstants
  - uk.ac.ic.doc.automed.p2p.directory.P2PDirectoryRepository
  - uk.ac.ic.doc.automed.p2p.gui.P2PGui
  - uk.ac.ic.doc.automed.p2p.protocol.P2PProtocol
  - uk.ac.ic.doc.automed.reps.Pathway (implements uk.ac.ic.doc.automed.reps.PersistentObject)
    - uk.ac.ic.doc.automed.reps.PathwayAbstraction
  - uk.ac.ic.doc.automed.p2p.PathwayDescription (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.reps.pathway.PathwayFinderConfiguration
  - uk.ac.ic.doc.automed.p2p.PathwayGetter
  - uk.ac.ic.doc.automed.tml.PathwayOptimiser
  - uk.ac.ic.doc.automed.ssd.Pattern
  - uk.ac.bbk.dcs.automed.qproc.optimise.PatternRule (implements uk.ac.bbk.dcs.automed.qproc.optimise.Rule)
  - uk.ac.ic.doc.automed.p2p.gui.PeerApplication
  - uk.ac.ic.doc.automed.p2p.PeerCache
  - uk.ac.ic.doc.automed.p2p.directory.PeerDescription (implements uk.ac.ic.doc.automed.p2p.directory.P2PDirectoryObject)
  - uk.ac.ic.doc.automed.p2p.PeerEnvironment
  - uk.ac.ic.doc.automed.p2p.state.PeerStateHandler
  - uk.ac.ic.doc.automed.util.persist.PersistentDB (implements uk.ac.ic.doc.automed.util.persist.DuplicatePersistentHandler)
  - uk.ac.ic.doc.automed.util.persist.PersistentDBController
  - uk.ac.ic.doc.automed.reps.PersistentKey
  - uk.ac.ic.doc.automed.util.persist.PersistentKey (implements java.io.Serializable)
  - uk.ac.ic.doc.automed.util.persist.PersistentValue
  - uk.ac.bbk.dcs.automed.qproc.optimise.PhysicalOptimiser
  - uk.ac.ic.doc.automed.editor.PinBoardLayout (implements java.awt.LayoutManager)
  - uk.ac.bbk.dcs.automed.xml.utilities.PrintUtility
  - uk.ac.ic.doc.automed.reps.Protocol
  - uk.ac.ic.doc.rodex.p2p.protocol.QEP
  - uk.ac.bbk.dcs.automed.qproc.QProcLogger
  - uk.ac.bbk.dcs.automed.qproc.iql.QSym
  - uk.ac.ic.doc.rodex.qproc.QualityIndicator (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.rodex.qproc.QueryAnalyser
  - uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationFactory
  - uk.ac.bbk.dcs.automed.dataWarehousing.util.QueryDecomposer
  - uk.ac.ic.doc.rodex.qproc.QueryDescription (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.bbk.dcs.automed.qproc.evaluate.QueryEvaluationFactory
  - uk.ac.ic.doc.automed.qproc.eval.QueryEvaluationFactory
  - uk.ac.ic.doc.automed.p2p.overlay.QueryFilter (implements ow.dht.advanced.EntryFilter<V>)
  - uk.ac.ic.doc.rodex.qproc.QueryFunction
  - uk.ac.ic.doc.automed.p2p.QueryGetter (implements uk.ac.ic.doc.automed.qproc.IQueryAggregator)
    - uk.ac.ic.doc.rodex.p2p.AdvancedQueryGetter
  - uk.ac.ic.doc.rodex.qproc.QueryMediator (implements uk.ac.ic.doc.automed.qproc.IQueryMediator)
  - uk.ac.bbk.dcs.automed.qproc.optimise.QueryOptimisationFactory
  - uk.ac.ic.doc.automed.qproc.opti.QueryOptimisationFactory
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.QueryParser
    - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.Schemes (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SchemesConstants)
    - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleComp (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCompConstants)
    - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCompAppend (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCompAppendConstants)
    - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCompAppendMonus (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCompAppendMonusConstants)
  - uk.ac.bbk.dcs.automed.qproc.QueryProcessor
  - uk.ac.bbk.dcs.automed.qproc.QueryProcessorConfiguration
    - uk.ac.ic.doc.automed.qproc.P2PQueryProcessorConfiguration
    - uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationConfiguration
    - uk.ac.ic.doc.automed.qproc.eval.QueryEvaluationConfiguration
    - uk.ac.ic.doc.automed.qproc.opti.QueryOptimisationConfiguration
    - uk.ac.ic.doc.automed.qproc.refo.QueryReformulationConfiguration
    - uk.ac.bbk.dcs.automed.xml.XMLQPConfiguration
  - uk.ac.bbk.dcs.automed.qproc.reformulate.QueryReformulationFactory
  - uk.ac.bbk.dcs.automed.qproc.reformulate.QueryReformulator (implements uk.ac.ic.doc.automed.qproc.refo.QueryReformulationProvider)
  - uk.ac.ic.doc.automed.p2p.QueryResultDescription
  - uk.ac.ic.doc.rodex.qproc.QueryResultProducer
  - uk.ac.ic.doc.rodex.qproc.QueryRewriteProcessor
  - uk.ac.ic.doc.rodex.qproc.QueryRewriter
    - uk.ac.ic.doc.rodex.qproc.MiniConQueryRewriter
      - uk.ac.ic.doc.rodex.qproc.MiniConQueryRewriterAdaptive
      - uk.ac.ic.doc.rodex.qproc.MiniConQueryRewriterNonConjunctive
    - uk.ac.ic.doc.rodex.qproc.RangeBasedQueryRewriter
  - uk.ac.ic.doc.rodex.qproc.QueryRewriterResult
    - uk.ac.ic.doc.rodex.qproc.RangeBasedQueryRewriterResult
  - uk.ac.ic.doc.rodex.qproc.QuerySubGoal
  - uk.ac.ic.doc.rodex.qproc.QueryVariable
  - uk.ac.ic.doc.automed.editor.autolayout.Queue
  - uk.ac.ic.doc.automed.util.queue.Queue
  - uk.ac.ic.doc.automed.util.queue.QueueWorker (implements uk.ac.ic.doc.automed.util.thread.Threadable)
  - uk.ac.ic.doc.automed.matching.Range
  - uk.ac.bbk.dcs.automed.rdfs.RDFSConstants
  - uk.ac.bbk.dcs.automed.rdfs.RDFSModel
  - uk.ac.bbk.dcs.automed.qproc.reformulate.ReformulationUtility
  - uk.ac.ic.doc.automed.reps.RelationalOutputter
  - uk.ac.ic.doc.automed.matching.RelationshipExtractor
    - uk.ac.ic.doc.automed.matching.SQLRelationshipExtractor
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.RelationSKJEliminator
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.RelativeEuclideanClassifier (implements uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Classifier)
  - uk.ac.ic.doc.automed.p2p.protocol.Request
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Pathway
    - uk.ac.ic.doc.automed.p2p.protocol.Request.PathwayToSource
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Port
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Query
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Register
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Remove
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Schema
    - uk.ac.ic.doc.automed.p2p.protocol.Request.Unknown
  - uk.ac.bbk.dcs.automed.qproc.iql.ReservedTokens
  - uk.ac.ic.doc.automed.p2p.communication.ResponseHandler
  - uk.ac.ic.doc.automed.editor.layout.RootLayout (implements uk.ac.ic.doc.automed.editor.layout.LayoutInterface)
    - uk.ac.ic.doc.automed.editor.layout.AestheticRootLayout
    - uk.ac.ic.doc.automed.editor.layout.LogicalRootLayout
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.RunAll
  - uk.ac.bbk.dcs.automed.xml.materialisation.SAXMaterialiser
  - uk.ac.ic.doc.automed.reps.Schema (implements uk.ac.ic.doc.automed.reps.PersistentObject, uk.ac.ic.doc.automed.editor.Positionable)
  - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.SchemaAccessibility (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.p2p.SchemaAdvertiser
  - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.SchemaAdvertMsg (implements uk.ac.ic.doc.automed.p2p.messages.applicationlayer.ApplicationMessage)
  - uk.ac.ic.doc.automed.reps.SchemaChangeEvent
  - uk.ac.ic.doc.automed.p2p.directory.SchemaDescription (implements uk.ac.ic.doc.automed.p2p.directory.P2PDirectoryObject)
  - uk.ac.ic.doc.automed.matching.SchemaElement
  - uk.ac.ic.doc.automed.matching.SchemaElementPair
    - uk.ac.ic.doc.automed.matching.SchemaElementPairRelationship
    - uk.ac.ic.doc.automed.matching.SimilarSchemaElementPair (implements java.lang.Comparable<T>)
    - uk.ac.ic.doc.automed.matching.UncertainSchemaElementPair
  - uk.ac.bbk.dcs.automed.evolution2.schemaEvolution.SchemaEvolution (implements uk.ac.bbk.dcs.automed.evolution2.Evolution)
    - uk.ac.bbk.dcs.automed.evolution2.schemaEvolution.ExtensionalSchemaEvolution
    - uk.ac.bbk.dcs.automed.evolution2.schemaEvolution.IntegratedSchemaEvolution
  - uk.ac.ic.doc.automed.p2p.SchemaGetter
  - uk.ac.ic.doc.automed.reps.SchemaMapGenerator
  - uk.ac.ic.doc.automed.reps.SchemaObject (implements java.lang.Comparable<T>, java.util.Comparator<T>, uk.ac.ic.doc.automed.reps.PersistentObject, uk.ac.ic.doc.automed.editor.Positionable)
  - uk.ac.ic.doc.automed.p2p.overlay.SchemaObjectAbstraction (implements java.io.Serializable)
  - uk.ac.ic.doc.automed.p2p.SchemaPublisher
  - uk.ac.ic.doc.rodex.p2p.messages.applicationlayer.SchemaRegMsg (implements uk.ac.ic.doc.automed.p2p.messages.applicationlayer.ApplicationMessage)
  - uk.ac.ic.doc.automed.reps.Scheme (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.bbk.dcs.automed.qproc.iql.SchemeInfo (implements java.io.Serializable)
  - uk.ac.ic.doc.automed.wrappers.SchemeInstances
  - uk.ac.ic.doc.automed.wrappers.SchemeQuery
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SchemesTokenManager (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SchemesConstants)
  - uk.ac.ic.doc.automed.matching.relationships.SemanticRelationship
    - uk.ac.ic.doc.automed.matching.relationships.Compatibility
    - uk.ac.ic.doc.automed.matching.relationships.Disjointness
    - uk.ac.ic.doc.automed.matching.relationships.Equivalence
    - uk.ac.ic.doc.automed.matching.relationships.Incompatibility
    - uk.ac.ic.doc.automed.matching.relationships.Overlapness
    - uk.ac.ic.doc.automed.matching.relationships.Subsumption
      - uk.ac.ic.doc.automed.matching.relationships.Subset
      - uk.ac.ic.doc.automed.matching.relationships.Superset
  - uk.ac.ic.doc.automed.p2p.communication.ServerFactory
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.Set1_121x101
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.Set1_181x151
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.Set1_241x201
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.Set1_301x251
  - uk.ac.bbk.dcs.automed.xml.experiments.subclass.set1.Set1_61x51
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1A100x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1A20x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1A40x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1A60x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1A80x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1B100x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1B20x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1B40x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1B60x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1B80x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1C100x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1C20x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1C40x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1C60x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set1.Set1C80x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2A100x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2A20x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2A40x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2A60x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2A80x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2B100x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2B20x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2B40x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2B60x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set2.Set2B80x20
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A1000x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A100x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A200x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A300x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A400x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3A500x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3B100x100
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3B100x200
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3B100x300
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3B100x400
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set3.Set3B100x500
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set0.SetA100x52
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set0.SetA150x52
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set0.SetA200x52
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set0.SetA250x52
  - uk.ac.bbk.dcs.automed.xml.experiments.other.set0.SetA50x52
  - uk.ac.ic.doc.automed.util.SetUtil
  - uk.ac.ic.doc.rodex.p2p.protocol.SICP
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.SimilarCluster
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SimpleCharStream
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCharStream
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCharStream
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCharStream
  - uk.ac.bbk.dcs.automed.qproc.translators.xquery.SimpleCharStream
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCompAppendMonusTokenManager (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCompAppendMonusConstants)
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCompAppendTokenManager (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCompAppendConstants)
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCompTokenManager (implements uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCompConstants)
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeICase1
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeICase2
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeICase3
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIICase1
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIICase2
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIICase3
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIIICase1
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIIICase2
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIIICase3
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIIICase4
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIVCase1
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIVCase2
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIVCase3
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIVCase4
  - uk.ac.bbk.dcs.automed.xml.experiments.skolem.SkolemTypeIVCase5
  - uk.ac.bbk.dcs.automed.evolution.schemaModelEvolution.SMEvolution (implements uk.ac.bbk.dcs.automed.evolution.Evolution)
    - uk.ac.bbk.dcs.automed.evolution.schemaModelEvolution.ExtensionalSchemaEvolution
    - uk.ac.bbk.dcs.automed.evolution.schemaModelEvolution.VirtualSchemaEvolution
  - uk.ac.bbk.dcs.automed.hdmstore.Span
  - uk.ac.ic.doc.automed.util.db.SQLFunctions
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.SQLWrapperSKJOptimiser
  - uk.ac.ic.doc.rodex.p2p.protocol.SRCP
  - uk.ac.ic.doc.automed.ssd.SSDFormat
  - uk.ac.ic.doc.automed.ssd.SSDPattern
  - uk.ac.ic.doc.automed.SSMDR
  - uk.ac.bbk.dcs.automed.qproc.optimise.StandardOptimisationProvider (implements uk.ac.ic.doc.automed.qproc.opti.QueryOptimisationProvider)
  - uk.ac.bbk.dcs.automed.qproc.annotate.StandardQueryAnnotationProvider (implements uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationProvider)
  - uk.ac.ic.doc.automed.STR
  - java.io.StreamTokenizer
    - uk.ac.ic.doc.automed.reps.Syntax.Tokenizer
  - uk.ac.ic.doc.automed.util.hashing.StringHashFactory
  - uk.ac.ic.doc.automed.STRMethodTest
  - uk.ac.ic.doc.automed.editor.Syntax
  - uk.ac.ic.doc.automed.reps.Syntax
  - uk.ac.ic.doc.automed.reps.Syntax.Token
  - uk.ac.ic.doc.automed.p2p.messages.applicationlayer.TellBrokerQuery
  - uk.ac.ic.doc.automed.tml.TempPathway
  - uk.ac.bbk.dcs.automed.qproc.TempQueryProcessor
  - uk.ac.bbk.dcs.automed.xml.experiments.crime.Test
  - uk.ac.ic.doc.automed.tests.p2p.TestDBProcess
  - java.lang.Thread (implements java.lang.Runnable)
    - uk.ac.ic.doc.automed.util.thread.AsynchThread
    - uk.ac.ic.doc.automed.util.thread.TimedThread
  - java.lang.Throwable (implements java.io.Serializable)
    - java.lang.Error
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.TokenMgrError
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.TokenMgrError
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.TokenMgrError
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.TokenMgrError
      - uk.ac.bbk.dcs.automed.qproc.translators.xquery.TokenMgrError
    - java.lang.Exception
      - uk.ac.ic.doc.automed.AutoMedException
        - uk.ac.ic.doc.automed.p2p.ApplicationPropertyException
        - uk.ac.ic.doc.automed.p2p.AuthenticationException
        - uk.ac.ic.doc.automed.p2p.tree.AutoMedTreeException
        - uk.ac.ic.doc.automed.reps.AutoRepException
          - uk.ac.ic.doc.automed.reps.TypeMismatchException
        - uk.ac.ic.doc.automed.reps.BadSchemaException
        - uk.ac.bbk.dcs.automed.qproc.reformulate.BuildViewException
        - uk.ac.ic.doc.automed.util.cache.CacheException
          - uk.ac.ic.doc.automed.util.cache.CacheIntegrityException
        - uk.ac.ic.doc.automed.p2p.communication.CommunicationException
          - uk.ac.ic.doc.automed.p2p.communication.PortInUseException
          - uk.ac.ic.doc.automed.p2p.communication.UDPOutOfSyncException
        - uk.ac.ic.doc.automed.editor.ConfigException
          - uk.ac.ic.doc.automed.editor.SemanticException
          - uk.ac.ic.doc.automed.editor.SyntaxException
          - uk.ac.ic.doc.automed.editor.UnexpectedTokenException
        - uk.ac.ic.doc.automed.reps.ConstructSchemeSyntaxException
        - uk.ac.ic.doc.automed.util.CreateInstanceException
        - uk.ac.ic.doc.automed.wrappers.DataSourceException
        - uk.ac.ic.doc.automed.util.db.DBInstanceException
        - uk.ac.ic.doc.automed.DSRException
          - uk.ac.ic.doc.automed.DataSourceRepositoryException
        - uk.ac.bbk.dcs.automed.evolution2.EvolutionException
          - uk.ac.bbk.dcs.automed.evolution2.dataEvolution.DataEvolutionException
          - uk.ac.bbk.dcs.automed.evolution2.modelEvolution.ModelEvolutionException
          - uk.ac.bbk.dcs.automed.evolution2.schemaEvolution.SchemaEvolutionException
        - uk.ac.ic.doc.automed.p2p.FailedOperationException
        - uk.ac.ic.doc.automed.p2p.HandlerNotFoundException
        - uk.ac.bbk.dcs.automed.hdmstore.HdmStoreException
        - uk.ac.ic.doc.automed.reps.IllegalOperationException
        - uk.ac.ic.doc.automed.p2p.messages.abstractlayer.IncompleteMessageException
        - uk.ac.ic.doc.automed.IntegrityException
        - uk.ac.bbk.dcs.automed.qproc.iql.IQLException
        - uk.ac.ic.doc.automed.util.db.JDBCDriverException
        - uk.ac.ic.doc.automed.p2p.messages.abstractlayer.MalformedMessageException
        - uk.ac.ic.doc.automed.MDRException
        - uk.ac.ic.doc.automed.NotFoundException
          - uk.ac.bbk.dcs.automed.qproc.ProviderInitialisationException
          - uk.ac.ic.doc.automed.qproc.ProviderNotFoundException
        - uk.ac.ic.doc.automed.tml.NotOptimisableException
        - uk.ac.ic.doc.automed.p2p.overlay.OverlayException
        - uk.ac.ic.doc.automed.p2p.P2PException
        - uk.ac.bbk.dcs.automed.qproc.iql.ParseException
        - uk.ac.ic.doc.automed.util.persist.PersistentDBException
        - uk.ac.bbk.dcs.automed.qproc.QProcException
          - uk.ac.bbk.dcs.automed.wrappers.TranslationException
        - uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationException
        - uk.ac.ic.doc.automed.qproc.eval.QueryEvaluationException
        - uk.ac.ic.doc.automed.qproc.QueryFormatException
        - uk.ac.ic.doc.rodex.qproc.QueryIntegrityException
        - uk.ac.ic.doc.automed.qproc.opti.QueryOptimisationException
        - uk.ac.ic.doc.rodex.qproc.QueryProcessingException
        - uk.ac.ic.doc.automed.qproc.refo.QueryReformulationException
          - uk.ac.bbk.dcs.automed.qproc.reformulate.LAVQueryReformulationException
        - uk.ac.ic.doc.rodex.qproc.QueryResultException
        - uk.ac.ic.doc.rodex.qproc.QueryRewriterException
          - uk.ac.ic.doc.rodex.qproc.RewritingNotExistException
        - uk.ac.ic.doc.automed.util.queue.QueueException
        - uk.ac.ic.doc.automed.RepositoryAccessException
        - uk.ac.ic.doc.automed.reps.SchemasNotIdenticalException
        - uk.ac.ic.doc.automed.SSMDRException
        - uk.ac.ic.doc.automed.p2p.state.StateChangedException
        - uk.ac.ic.doc.automed.STRException
        - uk.ac.ic.doc.automed.reps.SyntaxException
          - uk.ac.ic.doc.automed.reps.UnexpectedTokenException
        - uk.ac.bbk.dcs.automed.qproc.iql.TypeException
        - uk.ac.ic.doc.automed.p2p.UnsuccessfulReplyException
          - uk.ac.ic.doc.automed.p2p.ErrorReplyException
          - uk.ac.ic.doc.automed.p2p.FailReplyException
          - uk.ac.ic.doc.automed.p2p.IllegalReplyException
        - uk.ac.bbk.dcs.automed.xml.XMLException
          - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSGraphException
          - uk.ac.bbk.dcs.automed.xml.XMLNotFoundException
          - uk.ac.bbk.dcs.automed.xml.XMLRestructuringException
        - uk.ac.bbk.dcs.automed.xml.materialisation.XMLMaterialisationException
      - uk.ac.ic.doc.automed.editor.CommandLineException
        - uk.ac.ic.doc.automed.editor.EditorException
      - uk.ac.bbk.dcs.automed.evolution.EvolutionException
        - uk.ac.bbk.dcs.automed.evolution.dataEvolution.DataEvolutionException
        - uk.ac.bbk.dcs.automed.evolution.schemaModelEvolution.SMEvolutionException
      - uk.ac.bbk.dcs.automed.graph.GraphException
      - uk.ac.ic.doc.automed.matching.IntegratorException
      - uk.ac.ic.doc.automed.matching.InvalidElementException
      - uk.ac.ic.doc.automed.matching.MatchException
        - uk.ac.ic.doc.automed.matching.UninstantiatedElementException
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.ParseException
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.ParseException
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.ParseException
      - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.ParseException
      - uk.ac.bbk.dcs.automed.qproc.translators.xquery.ParseException
      - uk.ac.ic.doc.automed.matching.RelationshipConflictException
      - uk.ac.ic.doc.automed.matching.RelationshipExtractorException
      - java.lang.RuntimeException
        - uk.ac.ic.doc.automed.InconsistentException
        - uk.ac.ic.doc.automed.NotImplementedException
      - uk.ac.ic.doc.automed.matching.UninstantiatedException
      - uk.ac.ic.doc.automed.xml.XMLException
        - uk.ac.ic.doc.automed.xml.XMLReaderException
        - uk.ac.ic.doc.automed.xml.XMLSyntaxException
          - uk.ac.ic.doc.automed.xml.IlegleXMLCharacterException
        - uk.ac.ic.doc.automed.xml.XMLWriterException
      - uk.ac.ic.doc.automed.xml.XMLifyConstants.IgnoreNextElementException
  - uk.ac.ic.doc.automed.tml.TML
    - uk.ac.ic.doc.automed.tml.TempTML
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.Token
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.Token
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.Token
  - uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.Token
  - uk.ac.bbk.dcs.automed.qproc.translators.xquery.Token
  - uk.ac.bbk.dcs.automed.dataWarehousing.util.Tools4DW
  - uk.ac.ic.doc.automed.reps.Transformation (implements java.lang.Comparable<T>, uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.reps.TransformationAbstraction (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.bbk.dcs.automed.xml.relational.TransformationsIssuer
  - uk.ac.bbk.dcs.automed.dataWarehousing.dlt.TransfStep
  - uk.ac.bbk.dcs.automed.wrappers.Translator
    - uk.ac.bbk.dcs.automed.wrappers.SQLTranslator
  - uk.ac.ic.doc.automed.p2p.tree.TreeBuilder
  - uk.ac.ic.doc.automed.xmlschema.tree.TreeDragSource (implements java.awt.dnd.DragGestureListener, java.awt.dnd.DragSourceListener)
  - uk.ac.ic.doc.automed.xmlschema.tree.TreeDropTarget (implements java.awt.dnd.DropTargetListener)
  - uk.ac.bbk.dcs.automed.graph.TreeNode
  - uk.ac.ic.doc.automed.p2p.tree.TreeNode
    - uk.ac.ic.doc.automed.p2p.tree.AutoMedObject
    - uk.ac.ic.doc.automed.p2p.tree.CollectionSet
    - uk.ac.ic.doc.automed.p2p.tree.Field
    - uk.ac.ic.doc.automed.p2p.tree.MainObjectClasses
    - uk.ac.ic.doc.automed.p2p.tree.ObjectCollection
    - uk.ac.ic.doc.automed.p2p.tree.Root
    - uk.ac.ic.doc.automed.p2p.tree.Value
      - uk.ac.ic.doc.automed.p2p.tree.Reference
      - uk.ac.ic.doc.automed.p2p.tree.ValueList
  - com.sleepycat.bind.tuple.TupleBase
    - com.sleepycat.bind.tuple.TupleBinding (implements com.sleepycat.bind.EntryBinding)
      - uk.ac.ic.doc.automed.util.persist.AbstractObjectBinding
        - uk.ac.ic.doc.automed.qproc.cache.CacheObjectBinding
  - uk.ac.bbk.dcs.automed.qproc.iql.TypeChecker
  - uk.ac.bbk.dcs.automed.qproc.iql.TypeConstants
  - uk.ac.ic.doc.automed.reps.TypeHierarchy (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.ic.doc.automed.reps.TypeHierarchy.TypeObject (implements uk.ac.ic.doc.automed.reps.PersistentObject)
  - uk.ac.bbk.dcs.automed.xml.utilities.UIDUtility
  - uk.ac.bbk.dcs.automed.qproc.optimise.optimisers.UnnestOptimiser
  - uk.ac.ic.doc.automed.editor.UserActionClass
  - uk.ac.ic.doc.automed.editor.UserActionResult
  - uk.ac.ic.doc.automed.Util
  - uk.ac.ic.doc.automed.matching.Util
  - uk.ac.ic.doc.automed.p2p.util.Util
  - uk.ac.ic.doc.rodex.qproc.Util
  - uk.ac.ic.doc.automed.reps.Utility
  - uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Vectors (implements jsom.data.Data)
  - uk.ac.bbk.dcs.automed.qproc.reformulate.ViewKey
  - uk.ac.bbk.dcs.automed.xml.experiments.ws.WrapInterproOutput
  - uk.ac.bbk.dcs.automed.xml.experiments.ws.WrapUniProtOutput
  - uk.ac.bbk.dcs.automed.xml.XMLConstants
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSDOM
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSDOMFromXSD
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSFromAMSchema
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSFromDTD
  - uk.ac.bbk.dcs.automed.xml.relational.XMLDSSFromRDB
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSFromXMLSchema
  - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSGraph
  - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSGraphAttribute
  - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSGraphElement
  - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSGraphText
  - uk.ac.bbk.dcs.automed.xml.materialisation.XMLDSSMaterialiser
    - uk.ac.bbk.dcs.automed.xml.materialisation.XMLDSSDOMMaterialiser
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLDSSNXDB
  - uk.ac.bbk.dcs.automed.xml.xmldssGraph.XMLDSSRestructurer
  - uk.ac.bbk.dcs.automed.xml.materialisation.XMLDSSSAXMaterialiser
  - uk.ac.ic.doc.automed.p2p.util.XmlHandler
  - uk.ac.ic.doc.automed.xmlschema.output.XMLOutputter
  - uk.ac.bbk.dcs.automed.xml.XMLRestructurer
  - uk.ac.ic.doc.automed.xmlschema.XMLSchemaBuilder
  - uk.ac.ic.doc.automed.reps.XMLSchemaOutputter
  - uk.ac.ic.doc.automed.xmlschema.output.XMLSchemaOutputter
  - uk.ac.bbk.dcs.automed.xml.wrappers.XMLSchemaValidator
  - uk.ac.ic.doc.automed.xml.XMLSyntax
  - uk.ac.ic.doc.automed.xml.XMLToken (implements uk.ac.ic.doc.automed.xml.XMLifyConstants)
  - uk.ac.bbk.dcs.automed.xml.utilities.XMLUtilities
  - uk.ac.ic.doc.automed.xml.XMLWriter
  - uk.ac.ic.doc.automed.xmlschema.output.XPathSelector
  - uk.ac.bbk.dcs.automed.qproc.translators.xquery.XQuery2IQL (implements uk.ac.bbk.dcs.automed.qproc.translators.Translator, uk.ac.bbk.dcs.automed.qproc.translators.xquery.XQuery2IQLConstants)
  - uk.ac.bbk.dcs.automed.qproc.translators.xquery.XQuery2IQLTokenManager (implements uk.ac.bbk.dcs.automed.qproc.translators.xquery.XQuery2IQLConstants)
  - uk.ac.ic.doc.automed.wrappers.xsdomobject.XSDOMObject
    - uk.ac.ic.doc.automed.wrappers.xsdomobject.Attribute
    - uk.ac.ic.doc.automed.wrappers.xsdomobject.ComplexType
    - uk.ac.ic.doc.automed.wrappers.xsdomobject.Element

## Interface Hierarchy

- uk.ac.ic.doc.automed.p2p.messages.applicationlayer.ApplicationMessage
- uk.ac.ic.doc.automed.util.cache.CacheListener
- uk.ac.ic.doc.automed.util.cache.CacheManagementListener
- uk.ac.ic.doc.automed.qproc.cache.CachePolicy
- uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.Classifier
- uk.ac.ic.doc.automed.matching.modules.bidirectionalmap.ComparableExact
- uk.ac.ic.doc.automed.Constants
- uk.ac.ic.doc.automed.editor.Drawable
  - uk.ac.ic.doc.automed.editor.DrawableArc
  - uk.ac.ic.doc.automed.editor.DrawableVertex
- java.util.EventListener
  - uk.ac.ic.doc.automed.p2p.directory.PeerEventListener
  - uk.ac.ic.doc.automed.p2p.directory.SchemaEventListener
- uk.ac.bbk.dcs.automed.evolution.Evolution
- uk.ac.bbk.dcs.automed.evolution2.Evolution
- uk.ac.ic.doc.automed.xmlschema.tree.IconAndTipCarrier
- uk.ac.ic.doc.automed.qproc.IQueryAggregator
- uk.ac.ic.doc.automed.qproc.IQueryMediator
- java.util.Iterator<E>
  - uk.ac.ic.doc.automed.util.cache.Cacheable
    - uk.ac.ic.doc.automed.qproc.cache.IQueryCache (also extends uk.ac.ic.doc.rodex.qproc.QueryRewritable)
- uk.ac.ic.doc.automed.util.queue.JobHandler
- uk.ac.ic.doc.automed.editor.layout.LayoutInterface
- uk.ac.ic.doc.automed.reps.ModelChangeListener
- uk.ac.ic.doc.automed.reps.ModelsListener
- uk.ac.ic.doc.automed.reps.NetworkChangeListener
- uk.ac.ic.doc.automed.reps.NetworksListener
- uk.ac.ic.doc.automed.p2p.directory.P2PDirectoryObject
- uk.ac.ic.doc.automed.reps.pathway.PathwayFinder
- uk.ac.ic.doc.automed.util.persist.Persistence
- uk.ac.ic.doc.automed.util.persist.PersistentHandler
  - uk.ac.ic.doc.automed.util.persist.DuplicatePersistentHandler
- uk.ac.ic.doc.automed.reps.PersistentObject
- uk.ac.ic.doc.automed.editor.Positionable
- uk.ac.bbk.dcs.automed.qproc.annotate.QueryAnnotationProvider
- uk.ac.ic.doc.automed.qproc.eval.QueryEvaluationProvider
- uk.ac.ic.doc.automed.qproc.opti.QueryOptimisationProvider
- uk.ac.ic.doc.automed.qproc.refo.QueryReformulationProvider
- uk.ac.ic.doc.rodex.qproc.QueryRewritable
  - uk.ac.ic.doc.automed.qproc.cache.IQueryCache (also extends uk.ac.ic.doc.automed.util.cache.Cacheable)
- uk.ac.ic.doc.automed.p2p.communication.RequestListener
- uk.ac.bbk.dcs.automed.qproc.optimise.Rule
- uk.ac.ic.doc.automed.reps.SchemaChangeListener
- uk.ac.ic.doc.automed.reps.SchemasListener
- uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SchemesConstants
- uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCompAppendConstants
- uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCompAppendMonusConstants
- uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCompConstants
- uk.ac.ic.doc.automed.p2p.state.StateChangedListener
- uk.ac.ic.doc.automed.util.hashing.StringHash
- uk.ac.ic.doc.automed.util.thread.Threadable
- uk.ac.bbk.dcs.automed.qproc.translators.Translator
- uk.ac.ic.doc.automed.xml.XMLifyConstants
- uk.ac.bbk.dcs.automed.qproc.translators.xquery.XQuery2IQLConstants

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