| 
Deprecated Methods | 
uk.ac.ic.doc.automed.p2p.tree.ObjectBuilder.addObjectsToModel(List, Model)
 
          use
             ModelObjectBuilder.createModel(AutoMedObject objectNode, boolean overwrite)
             instead  | 
uk.ac.ic.doc.automed.reps.Schema.containsSchemaObject(String)
 
          use Schema.contains(uk.ac.ic.doc.automed.reps.SchemaObject) instead  | 
uk.ac.ic.doc.automed.reps.Schema.createFollowingSchemaName(String)
 
          Use instread
 Generate a name of a schema that "appears" to be following the name used
 for this Schema, and which has not already been used as a Schema name  | 
uk.ac.ic.doc.automed.reps.Transformation.createIdentTransformations(Schema, Schema, String, String)
 
          Use #createIdentTransformations() instead.  | 
uk.ac.ic.doc.automed.reps.Transformation.createIntSchemaName(String, boolean, boolean)
 
          Now name schemas based on subnet name and number of schemas
 Use Schema.nextSchemaName.
 
 Creates a name for an intentional schema based on a given schema.  | 
uk.ac.ic.doc.automed.p2p.tree.ObjectBuilder.createModel(AutoMedObject)
 
          use
             ModelObjectBuilder.createModel(AutoMedObject objectNode, overwrite)
             instead  | 
uk.ac.ic.doc.automed.wrappers.AutoMedWrapperFactory.createSchema(AutoMedWrapper)
 
          use AutoMedWrapperFactory.populateSchema(AutoMedWrapper) instead  | 
uk.ac.ic.doc.automed.reps.Schema.differenceSchema(Schema)
 
          use differenceByName instead  | 
uk.ac.ic.doc.automed.reps.Schema.findAttachedDataSources()
 
          Use Schema.getAttachedSchemas(int) instead. Returns an array
             of Schema's that are connected to this schema by some
             transformation pathway and are data sources (including this
             schema itself if it is a data source). For each schema s
             returned, s.isDataSource() is true.  | 
uk.ac.ic.doc.automed.reps.Schema.findAttachedExtDBs()
 
          Use Schema.getAttachedSchemas(int) instead. Returns an array
             of Schema's that are connected to this schema by some
             transformation pathway and have extensional data (including
             this schema itself if it has extensional data). For each schema
             s returned, s.isExtDB() is true.  | 
uk.ac.ic.doc.automed.reps.Schema.findAttachedExtSchemas()
 
          Use Schema.getAttachedSchemas(int) instead. Returns an array
             of Schema's that are connected to this schema by some
             transformation pathway and are extensional schemas (including
             this schema itself if it is an extensional schema). For each
             schema s returned, s.isExtSchema() is true.  | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompMember.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.sql.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.translators.sql.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.translators.xquery.SimpleCharStream.getColumn()
 
             | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getGenerators()
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getHead()
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getInstance(Cell)
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.schemes.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleComp.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppend.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompAppendMonus.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.simpleCompMember.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.annotate.grammars.sql.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.translators.sql.SimpleCharStream.getLine()
 
             | 
uk.ac.bbk.dcs.automed.qproc.translators.xquery.SimpleCharStream.getLine()
 
             | 
uk.ac.ic.doc.automed.MDR.getMDR_DataSourceName()
 
          use MDR.getDataSourceName() instead  | 
uk.ac.ic.doc.automed.reps.Network.getNode(Node)
 
             | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getPredicates()
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.ic.doc.automed.reps.Schema.getSchemaObjectByName(String)
 
          Return the SchemaObject that has the supplied name in
             this schema. Note that the String supplied must match exactly
             the name of the SchemaObject as returned by SchemaObject.getSchemeNamesString()  | 
uk.ac.ic.doc.automed.reps.SchemaObject.getSchemaObjectByOBID(int)
 
          use SchemaObject.getSchemaObject(int) instead  | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getSchemes()
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.bbk.dcs.automed.qproc.iql.ASGComprehension.getSchemes(Cell, LinkedList)
 
          methods of this class have been moved to ASG - this class will be decommissioned  | 
uk.ac.ic.doc.automed.SSMDR.getSSMDR_DataSourceName()
 
          use getDataSourceName()  | 
uk.ac.ic.doc.automed.STR.getSTR_DataSourceName()
 
          use getDataSourceName()  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleRequest()
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleRequest(byte[])
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.RequestListener.handleRequest(byte[])
 
          use RequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleRequest(byte[], OutputStream)
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.RequestListener.handleRequest(byte[], OutputStream)
 
          use RequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleUDPRequest(byte[])
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.RequestListener.handleUDPRequest(byte[])
 
          use RequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleUDPRequest(InetAddress, int, byte[])
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.RequestListener.handleUDPRequest(InetAddress, int, byte[])
 
          use RequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.AbstractRequestListener.handleUDPRequest(String, int, byte[])
 
          use AbstractRequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.communication.RequestListener.handleUDPRequest(String, int, byte[])
 
          use RequestListener.handleRequest(byte[] dataReceived, ResponseHandler outputHandler)
             instead  | 
uk.ac.ic.doc.automed.p2p.tree.ObjectBuilder.initModel(AutoMedObject)
 
          use
             ModelObjectBuilder.createModel(AutoMedObject objectNode, overwrite)
             instead  | 
uk.ac.ic.doc.automed.reps.Schema.isDataSource()
 
          use Schema.getType() instead. Determines whether or not the
             schema represents an external data source.  | 
uk.ac.ic.doc.automed.reps.Schema.isExtDB()
 
          use Schema.getType() instead. Determines whether or not the
             schema represents an extentional database.  | 
uk.ac.ic.doc.automed.reps.Schema.isExtSchema()
 
          use Schema.getType() instead. Determines whether or not the
             schema is an extentional schema.  | 
uk.ac.bbk.dcs.automed.qproc.iql.Cell.isNum()
 
          use isNumberType() instead  | 
uk.ac.ic.doc.automed.wrappers.AutoMedWrapper.newAutoMedWrapper(AccessMethod)
 
          use getAutoMedWrapper(am) instead  | 
uk.ac.ic.doc.automed.wrappers.AutoMedWrapper.newAutoMedWrapper(AccessMethod, String)
 
          use getAutoMedWrapper  | 
uk.ac.ic.doc.automed.p2p.AutoMedPeer.outputPathwayToSource(AbstractMessage, ResponseHandler)
 
          use #outputSourcePathways(AbstractMessage request, OutputStream output)
               to get multiple pathways  | 
uk.ac.ic.doc.automed.p2p.util.Util.outputUnsuccessfulMessage(AbstractMessage, String, String, OutputStream)
 
          use
             Util.outputUnsuccessfulMessage(AbstractMessage request, String message,
             String performative, ResponseHandler output) instead  | 
uk.ac.ic.doc.automed.reps.Construct.removeConstructFromMap(Construct)
 
          Remove constructs using @link remove() which will
 also do the job of this method
 Removes from the HashMap that holds the CID and ref to all Construct
 objs.  | 
uk.ac.ic.doc.automed.reps.Schema.setDataSource(boolean)
 
          use {@link setType) instead. Sets whether or not the schema
             represents an external data source.  | 
uk.ac.ic.doc.automed.reps.Schema.setExtDB(boolean)
 
          use {@link setType) instead. Sets whether or not the schema
             represents an extentional database.  | 
uk.ac.ic.doc.automed.reps.Schema.setExtSchema(boolean)
 
          use {@link setType) instead. Sets whether or not the schema is
             an extentional schema.  | 
uk.ac.ic.doc.automed.MDR.setMDR_DataSourceName(String)
 
          use setDataSourceName() instead  | 
uk.ac.ic.doc.automed.SSMDR.setSSMDR_DataSourceName(String)
 
          use setDataSourceName()  | 
uk.ac.ic.doc.automed.STR.setSTR_DataSourceName(String)
 
          use setDataSourceName()  | 
uk.ac.bbk.dcs.automed.qproc.iql.Cell.textOBID()
 
          use @link{#text(boolean)} instead  |