- case1(String, ProvenanceServer) - Static method in class eu.transformproject.provenance.test.ProvenanceIterativeStorage
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- case1(String, ProvenanceServer) - Static method in class eu.transformproject.provenance.test.ProvenanceIterativeStorage_old
-
- case2(String, ProvenanceServer) - Static method in class eu.transformproject.provenance.test.ProvenanceIterativeStorage
-
- case2(String, ProvenanceServer) - Static method in class eu.transformproject.provenance.test.ProvenanceIterativeStorage_old
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- case3(String, ProvenanceServer) - Static method in class eu.transformproject.provenance.test.ProvenanceIterativeStorage
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- CENTRAL_ZONE_TAG - Static variable in interface eu.transformproject.provenance.service.ProvenanceConfigInterface
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- CentralProvenanceStore - Class in eu.transformproject.provenance.service
-
Provides the functionality for a central provenance store server configuration.
- ClassSpecif - Class in eu.transformproject.provenance.utils
-
- ClassSpecif() - Constructor for class eu.transformproject.provenance.utils.ClassSpecif
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- ClassUtils - Class in eu.transformproject.provenance.utils
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- ClassUtils() - Constructor for class eu.transformproject.provenance.utils.ClassUtils
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- clone(OPMEntity) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone.
- clone(OPMEntity, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone.
- clone(OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone.
- cloneAccount(OPMAccount, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone account.
- cloneAgent(OPMAgent, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone agent.
- cloneAnnotation(OPMAnnotation, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone annotation.
- cloneAnnotationOf(OPMEntity, OPMAnnotation) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone annotation of.
- cloneArtifact(OPMArtifact, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone artifact.
- cloneDependence(OPMDependence) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone dependence.
- cloneDependence(OPMDependence, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone dependence.
- cloneGraph(OPMGraph, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone graph.
- cloneGraph(OPMGraph, HashSet<OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone graph.
- cloneOPMEntity(OPMEntity, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone opm entity.
- cloneProcess(OPMProcess, HashMap<OPMEntity, OPMEntity>) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Clone process.
- closeFileWriter() - Method in class eu.transformproject.provenance.service.ProvenanceServer
-
- closeSession() - Method in interface eu.transformproject.provenance.representation.commonItInstantiation.CommomInstantiationInterface
-
Close a session.
- closeSession() - Method in class eu.transformproject.provenance.representation.commonItInstantiation.CommonInstantiation
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- closeSession() - Method in class eu.transformproject.provenance.storage.ProvenancePersistenceManager
-
- COLORS - Static variable in class eu.transformproject.provenance.opm.factory.OPMFactory
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- commitInstance() - Method in class eu.transformproject.provenance.representation.OPMGraphInstantiationSpec
-
- commitInstance(OPMGraph, String) - Method in class eu.transformproject.provenance.representation.OPMGraphInstantiationSpec
-
- commitInstance() - Method in class eu.transformproject.provenance.representation.TemplateDeploySpec
-
- commitInstance(OPMGraph) - Method in class eu.transformproject.provenance.representation.TemplateDeploySpec
-
- commitInstance(OPMGraph, InstantiationDesc) - Method in class eu.transformproject.provenance.representation.TemplateDeploySpec
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- CommomInstantiationInterface - Interface in eu.transformproject.provenance.representation.commonItInstantiation
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- CommonInstantiation - Class in eu.transformproject.provenance.representation.commonItInstantiation
-
- CommonInstantiation(String, String, boolean) - Constructor for class eu.transformproject.provenance.representation.commonItInstantiation.CommonInstantiation
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- completed() - Method in class eu.transformproject.provenance.representation.TemplateDeploymentDesc
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- completeValidation() - Method in class eu.transformproject.provenance.reasoning.ProvenanceReasoning
-
- composeAnnotation(String, String) - Method in class eu.transformproject.provenance.service.ProvenanceServer
-
- composeAnnotation(String, String) - Method in interface eu.transformproject.provenance.service.ProvenanceStorageInterface
-
Create an AnnotationSet object, initialising it with the annotation defined by the pair: owl_prop, value.
- composeAnnotation(String, String) - Method in class eu.transformproject.provenance.storage.ProvenancePersistenceManager
-
- CONDITIONS_PLACEHOLDER - Static variable in class eu.transformproject.provenance.query.ProvenanceQueryBasic
-
- ConfigReader - Class in eu.transformproject.provenance.utils
-
- ConfigReader_old - Class in eu.transformproject.provenance.utils
-
- containsClass(String) - Method in class eu.transformproject.provenance.reasoning.AbstractOnto
-
- containsClass(String) - Method in class eu.transformproject.provenance.reasoning.inProvStore.UpdatableOntoInProvStore
-
- containsClass(String) - Method in class eu.transformproject.provenance.reasoning.Onto
-
- containsdependenceWith(OPMEntityNode, OPMEntityNode) - Static method in class eu.transformproject.provenance.opm.utils.OPMEntityHelper
-
- containsEdge(OPMEntityNode, OPMEntityNode) - Method in class eu.transformproject.provenance.representation.OPMGraphTemplate
-
- containsProperty(String) - Method in class eu.transformproject.provenance.reasoning.AbstractOnto
-
- containsProperty(String) - Method in class eu.transformproject.provenance.reasoning.inProvStore.UpdatableOntoInProvStore
-
- containsProperty(String) - Method in class eu.transformproject.provenance.reasoning.Onto
-
- convertToOPMAnnotations(OPMEntity, AnnotationSet, Ontologies) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Convert to opm annotations.
- copyfile(String, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils
-
- copyfile(InputStreamReader, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils
-
- copyfile(String, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils_old
-
- copyfile(InputStreamReader, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils_old
-
- copyStrfile(String, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils
-
- copyStrfile(String, String, HashMap<String, String>) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils
-
- copyStrfile(Reader, String, HashMap<String, String>) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils
-
- copyStrfile(String, String) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils_old
-
- copyStrfile(String, String, HashMap<String, String>) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils_old
-
- copyStrfile(Reader, String, HashMap<String, String>) - Static method in class eu.transformproject.provenance.utils.ProvSytemUtils_old
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- createAndAnswerQuery(Date, Date, String, int, List) - Method in class eu.transformproject.provenance.ws.ProvenanceWS_DataQualityTool
-
- createAndAnswerQuery(Date, Date, String, int, List) - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_DataQualityTool_Interface
-
createAndAnswerQuery.
- createAnnotation(OPMEntity, Property, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createCausalDependence(OPMEntityNode, OPMEntityNode) - Method in class eu.transformproject.provenance.storage.ProvenancePersistenceManager
-
- createCentralProvenanceZone(String) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createCentralProvenanceZone(CentralProvenanceStore) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createCentralProvenanceZone(String) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createCentralProvenanceZone(CentralProvenanceStore) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createDataExtraction(Object, Date) - Method in class eu.transformproject.provenance.ws.ProvenanceWS_QueryTool
-
- createDataExtraction(Object, Date) - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_QueryTool_Interface
-
createDataExtraction.
- createDependence(OPMEntityNode, OPMEntityNode) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createDependence(OPMEntityNode, OPMEntityNode, String, String, boolean) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createDependence(OPMEntityNode, OPMEntityNode, String, String, OPMDependenceType, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createDependence(OPMEntityNode, OPMEntityNode, String, String, OPMDependenceType, OPMEntityType, boolean) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createDependenceType(DependenceType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createdNewOPMEntity() - Method in class eu.transformproject.provenance.representation.TemplateDeploySpec
-
- createEC(Object, Date) - Method in class eu.transformproject.provenance.ws.ProvenanceWS_QueryTool
-
- createEC(Object, Date) - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_QueryTool_Interface
-
createEC.
- createEntityType(EntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createGraph(String) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createInitScript() - Method in class eu.transformproject.provenance.service.ProvenanceStore
-
- createLocalProvenanceZone(String) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createLocalProvenanceZone(String, int) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createLocalProvenanceZone(ProvenanceStore, String) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createLocalProvenanceZone(String) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createLocalProvenanceZone(String, int) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createLocalProvenanceZone(ProvenanceStore, String) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createNewQueryEC() - Method in class eu.transformproject.provenance.ws.ProvenanceWS_QueryTool
-
- createNewQueryEC() - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_QueryTool_Interface
-
createNewQueryEC.
- createOntology(String, String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMAccount(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMAccount(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMAgent(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMAgent(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
- createOPMAnnotation(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMAnnotation(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMArtifact(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMArtifact(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
- createOPMEntity(String, String, String, AnnotationSet, Ontologies) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(String, String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(EntityType, String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(OPMEntityType, String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(EntityType, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(OPMEntityType, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(EntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(EntityType, String, String, AnnotationSet, Ontologies) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMEntity(EntityType, String, String, AnnotationSet, Ontologies, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMGraph(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMGraph(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMGraph() - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMProcess(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createOPMProcess(String, String, OPMEntityType) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
- createProcessStatus(String, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createProperty(Ontology, String) - Static method in class eu.transformproject.provenance.opm.factory.OPMFactory
-
Creates a new OPM object.
- createProtocol(Object, Date) - Method in class eu.transformproject.provenance.ws.ProvenanceWS_QueryTool
-
- createProtocol(Object, Date) - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_QueryTool_Interface
-
createProtocol.
- createProvenance() - Method in class eu.transformproject.provenance.service.ProvenanceStore
-
- createProvenanceTemplate(ProvenanceExportFormat, String, String) - Static method in class eu.transformproject.provenance.representation.ProvenanceRepresentation
-
- createProvenanceTemplate(String, String) - Static method in class eu.transformproject.provenance.representation.ProvenanceRepresentation
-
- createProvenanceZones(String) - Static method in class eu.transformproject.provenance.service.ProvenanceAdmin
-
- createProvenanceZones(String) - Method in class eu.transformproject.provenance.storage.ProvenanceDBStorage
-
- createRootConfigElement(Document) - Method in class eu.transformproject.provenance.service.CentralProvenanceStore
-
- createRootConfigElement(Document) - Method in class eu.transformproject.provenance.service.LocalProvenanceStore
-
- createRootConfigElement(Document) - Method in class eu.transformproject.provenance.service.ProvenanceStore
-
- createSession(Object, String, String, Date) - Method in interface eu.transformproject.provenance.representation.commonItInstantiation.CommomInstantiationInterface
-
Create a session.
- createSession(Object, String, String, Date) - Method in class eu.transformproject.provenance.representation.commonItInstantiation.CommonInstantiation
-
- createStudy(String, Object, Date) - Method in class eu.transformproject.provenance.ws.ProvenanceWS_QueryTool
-
- createStudy(String, Object, Date) - Method in interface eu.transformproject.provenance.ws.ProvenanceWS_QueryTool_Interface
-
createStudy.